Showing : software error • reset
0
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2
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1.8k
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Error during installation of GEOquery package (R 4.0.3, Bioconduct 3.11)
software error GEOquery
updated 3.6 years ago by 1.6k • written 3.6 years ago by • 0
0
votes
0
replies
784
views
flowCore: gives a "emptyValue" error when / is used as an escape character in .fcs file metadata
software error
3.6 years ago andrea.mcewan • 0
0
votes
1
reply
1.5k
views
Error: Unable to establish connection with R session
software error
updated 3.6 years ago by 1.6k • written 3.6 years ago by • 0
0
votes
2
replies
802
views
DepMap copy number
software error depmap
updated 3.1 years ago by • 0 • written 3.6 years ago by • 0
0
votes
4
replies
1.6k
views
Error in GSVA: Error in dimnames(x) <- dn
software error
3.6 years ago ElaM • 0
4
votes
5
replies
2.2k
views
how to get exons of multiple genes
software error
3.6 years ago pegah.taklifi ▴ 30
0
votes
4
replies
1.2k
views
Viper error while creating Regulon object from minet adjacency matrix file ?
software error
updated 20 months ago by • 0 • written 3.6 years ago by • 0
0
votes
1
reply
808
views
Vignette Run Time
software error
updated 3.6 years ago by 25k • written 3.6 years ago by ▴ 10
3
votes
2
replies
1.7k
views
Failed to install 'MetaboAnalystR' from GitHub
software error MetaboAnalystR mzR
updated 3.6 years ago by 1.6k • written 3.6 years ago by • 0
0
votes
0
replies
690
views
vcountPDict Out-of-Memory Errors
software error Biostrings
3.7 years ago jennyl.smith12 • 0
0
votes
4
replies
3.7k
views
DESeq2 installation in R
software error
updated 3.7 years ago by 25k • written 3.7 years ago by • 0
1
vote
1
reply
1.3k
views
Error with view.molecule.2d function in rcdk
software error rcdk view.molecule.2d ViewMolecule2DTable
updated 3.7 years ago by ★ 3.9k • written 3.7 years ago by • 0
0
votes
2
replies
1.4k
views
Error in installing org.Hs.eg.db
software error org.Hs.eg.db win10
updated 3.7 years ago by 25k • written 3.7 years ago by • 0
3
votes
12
replies
2.5k
views
DESeq2 Installation Errors
deseq2 software error
updated 21 months ago by • 0 • written 3.7 years ago by • 0
0
votes
2
replies
1.3k
views
Error in installing ChemmineOB
software error ChemmineOB rand.h macOS
updated 3.7 years ago by • 0 • written 3.7 years ago by • 0
3
votes
3
replies
20k
views
Unable to install nloptr
software error
updated 3.2 years ago by ▴ 10 • written 3.7 years ago by • 0
0
votes
3
replies
1.5k
views
Error in Forge the target package (BSgenome)
software error BSgenome
3.7 years ago • updated 3.5 years ago jiazhou0116 • 0
1
vote
2
replies
895
views
error in forgeBSgenomeDataPkg
software error
updated 3.7 years ago by 65k • written 3.7 years ago by • 0
1
vote
1
reply
985
views
About generating a seed file (DCF format) for forging a BSgenome
software error BSgenome
updated 3.7 years ago by 16k • written 3.7 years ago by • 0
2
votes
3
replies
1.1k
views
Error in topGO analysis
software error topGO go
updated 3.7 years ago by ★ 3.9k • written 3.7 years ago by • 0
0
votes
3
replies
1.1k
views
Use xcms but mzR occurs error
software error xcms
updated 3.7 years ago by ★ 3.9k • written 3.7 years ago by • 0
2
votes
2
replies
1.8k
views
BiocParallel : unable to find an inherited method for function 'bplapply' for signature '"integer", "call"'
software error
updated 3.7 years ago by 25k • written 3.7 years ago by ▴ 140
0
votes
4
replies
1.5k
views
Error with xcms - requiring MSnbase 2.15.3 but not installing
software error xcms MSnbase
updated 3.7 years ago by 1.6k • written 3.7 years ago by • 0
7
votes
2
replies
4.5k
views
Help in installing certain pacakges
software error install
updated 3.8 years ago by 25k • written 3.8 years ago by ▴ 40
0
votes
3
replies
1.4k
views
Unable to install ffbase
software error
updated 3.8 years ago by 25k • written 3.8 years ago by • 0
5
votes
4
replies
1.9k
views
DESeq2 question about use of DESeqDataSetFromTximport() from RSEM data
deseq2 software error
updated 3.8 years ago by 42k • written 3.8 years ago by ▴ 10
1
vote
6
replies
3.2k
views
DEP package: Problems installing on macOS
software error DEP proteomics
updated 3.8 years ago by 1.6k • written 3.8 years ago by • 0
0
votes
0
replies
604
views
Dispersions Error in DEXSEQ
software error
3.8 years ago huck.thornton ▴ 10
0
votes
3
replies
1.3k
views
Cant update old packages
software error packages update
updated 3.8 years ago by 65k • written 3.8 years ago by • 0
4
votes
5
replies
1.4k
views
Installing DESeq2 fails ; R can't find basic commands like 'rm' and 'mv'
deseq2 install software error
3.8 years ago mja18 ▴ 40
0
votes
0
replies
642
views
makeBSseqData problem versions
software error
updated 3.9 years ago by 3.9k • written 3.9 years ago by • 0
8
votes
8
replies
2.6k
views
msa compilation failure - multiple definition of `GC_jmp_buf' in gc-7.2
software error msa
updated 2.6 years ago by ▴ 290 • written 3.9 years ago by ▴ 40
0
votes
0
replies
1.4k
views
In serialize(data, node$con)
software error
3.9 years ago thomas.boegl • 0
1
vote
4
replies
1.4k
views
Question: org.Hs.eg.db can not be downloaded
software error
3.9 years ago liuzhizheng1996 • 0
0
votes
0
replies
639
views
Error in data.frame(ASSIGN = "ASSIGN parameters", version = as.character(utils::packageVersion("ASSIGN")), : arguments imply differing number of …
software error assign
3.9 years ago yueli7 ▴ 20
1
vote
7
replies
1.3k
views
Question:Error installing BiocManager::install("org.Hs.eg.db") package.
software error
updated 3.9 years ago by ★ 3.9k • written 3.9 years ago by • 0
6
votes
5
replies
876
views
Security process for Bioconductor
software error
updated 3.9 years ago by 25k • written 3.9 years ago by ▴ 30
0
votes
2
replies
22k
views
Installing EnhancedVolcano package in R
microarray software error
updated 3.9 years ago by ★ 3.9k • written 3.9 years ago by • 0
0
votes
4
replies
3.9k
views
ggplot2 of PCA
software error ggplot2
updated 3.9 years ago by • 0 • written 3.9 years ago by ▴ 20
4
votes
4
replies
6.5k
views
plotPCA in DESeq2
software error deseq2
3.9 years ago yueli7 ▴ 20
5
votes
11
replies
1.6k
views
Rsubread: change in behavior when accepting mixed paired end and single end files
software error Rsubread
updated 3.9 years ago by 50k • written 3.9 years ago by • 0
2
votes
20
replies
2.8k
views
plotPCA in DESeq2
software error deseq2
3.9 years ago yueli7 ▴ 20
2
votes
2
replies
890
views
biomart webservice error when using data from Phytozome
software error go
3.9 years ago e.lopez-cortegano • 0
0
votes
4
replies
759
views
DEXSEQ error (no counts falling in this gene, there is nothing to plot).
software error
updated 3.9 years ago by ★ 3.9k • written 3.9 years ago by ▴ 10
0
votes
0
replies
598
views
The error when using "coMET" package
software error annotation
3.9 years ago yueli.yao • 0
0
votes
3
replies
496
views
DEXSEQ error (subscript out of boundsflattenedFile)
software error
3.9 years ago huck.thornton ▴ 10
2
votes
1
reply
849
views
bioCLite instalation failed
software error
3.9 years ago emily.biostats.1999 • 0
1
vote
2
replies
601
views
DEXSeq Illegal Strand Error
software error
3.9 years ago huck.thornton ▴ 10
0
votes
2
replies
966
views
GenomicFeatures load problem : "namespaceExport(ns, exports): undefined exports: %>%"
software error
updated 3.9 years ago by 25k • written 3.9 years ago by • 0
1
vote
1
reply
872
views
Error when installing edgeR and DESeq package
software error packages
updated 3.9 years ago by 65k • written 3.9 years ago by • 0
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Comment: all variables in design formula must be columns in colData (Deseq2) error by Galina • 0
thank you!
Comment: all variables in design formula must be columns in colData (Deseq2) error by ATpoint ★ 4.1k
coldata_rat <- data.frame(conditions=..., batch=...)
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it by robersy • 0
Thank you all for your comments. I will follow your suggestions.
Comment: Numerical differences in DESeq2 output depending on different design matrix cons by Ken C • 0
Hi Michael, thanks a lot for your prompt reply! Not sure if this is appropriate or if you are the right person to ask -- is there anything…
Comment: Numerical differences in DESeq2 output depending on different design matrix cons by Ken C • 0
Well, if I look at genes with baseMean>50, then the relative absolute difference in log2FoldChange (say over the absolute log2FoldChange of…
Votes
biomaRt not working - lazy table error
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
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